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How do I set the layer colors so when I bring in a new set of gerbers, each layer has the color I prefer?

To adjust layer colors:
   1. Go to menu: Setup | Synchronize Options...
   2. Assign default layer colors and layer names, and press ok.

Now anytime after you load gerbers, drills, etc; simply goto menu:  Setup | Synchronize Layers... click "Next" twice and the layer colors & names will be updated.
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